Search results for "Application programming interface"
showing 10 items of 13 documents
Proteomics Standards Initiative: Fifteen Years of Progress and Future Work.
2017
Abstract: The Proteomics Standards Initiative (PSI) of the Human Proteome Organization (HUPO) has now been developing and promoting open community standards and software tools in the field of proteomics for 15 years. Under the guidance of the chair, co-chairs, and other leadership positions, the PSI working groups are tasked with the development and maintenance of community standards via special workshops and ongoing work. Among the existing, ratified standards, the PSI working groups continue to update PSI-MI XML, MITAB, mzML, mzIdentML, mzQuantML, mzTab, and the MIAPE (Minimum Information About a Proteomics Experiment) guidelines with the advance of new technologies and techniques. Furthe…
Managing Multi-center Flow Cytometry Data for Immune Monitoring.
2014
With the recent results of promising cancer vaccines and immunotherapy 1 – 5 , immune monitoring has become increasingly relevant for measuring treatment-induced effects on T cells, and an essential tool for shedding light on the mechanisms responsible for a successful treatment. Flow cytometry is the canonical multi-parameter assay for the fine characterization of single cells in solution, and is ubiquitously used in pre-clinical tumor immunology and in cancer immunotherapy trials. Current state-of-the-art polychromatic flow cytometry involves multi-step, multi-reagent assays followed by sample acquisition on sophisticated instruments capable of capturing up to 20 parameters per cell at a…
Array programming with NumPy.
2020
Array programming provides a powerful, compact and expressive syntax for accessing, manipulating and operating on data in vectors, matrices and higher-dimensional arrays. NumPy is the primary array programming library for the Python language. It has an essential role in research analysis pipelines in fields as diverse as physics, chemistry, astronomy, geoscience, biology, psychology, materials science, engineering, finance and economics. For example, in astronomy, NumPy was an important part of the software stack used in the discovery of gravitational waves1 and in the first imaging of a black hole2. Here we review how a few fundamental array concepts lead to a simple and powerful programmi…
Potencialidades de Google Maps en la investigación social aplicada
2019
In recent years, Google has devoted resources to build a complete map of the world. They constantly scan the territory, collecting a large amount of data that provides updated and complete geographic information. This allows us to have an interoperable map that provides the end user with a search tool, not only of routes but also of shops, equipment and any type of geo-referenced information. In addition, Google Maps provides a series of Application Programming Interface (API), which provides a library of set of subroutines, functions and procedures (in object-oriented programming) that can be used by other software to automate the extraction of information of the Google platform. These fre…
A new approach for critical resources allocation
2009
This paper presents a solution based on Artificial Intelligence using Multi-objective Genetic Algorithms to optimize the allocation of teachers and classrooms. The implementation was created in order to optimize the process in both cases, allowing them to compete so as to establish a balance and arrive at a feasible solution quickly and efficiently.
The HITRAN2016 molecular spectroscopic database
2017
This paper describes the contents of the 2016 edition of the HITRAN molecular spectroscopic compilation. The new edition replaces the previous HITRAN edition of 2012 and its updates during the intervening years. The HITRAN molecular absorption compilation is composed of five major components: the traditional line-by-line spectroscopic parameters required for high-resolution radiative-transfer codes, infrared absorption cross-sections for molecules not yet amenable to representation in a line-by-line form, collision-induced absorption data, aerosol indices of refraction, and general tables such as partition sums that apply globally to the data. The new HITRAN is greatly extended in terms of …
MAGICPL: A Generic Process Description Language for Distributed Pseudonymization Scenarios
2021
Abstract Objectives Pseudonymization is an important aspect of projects dealing with sensitive patient data. Most projects build their own specialized, hard-coded, solutions. However, these overlap in many aspects of their functionality. As any re-implementation binds resources, we would like to propose a solution that facilitates and encourages the reuse of existing components. Methods We analyzed already-established data protection concepts to gain an insight into their common features and the ways in which their components were linked together. We found that we could represent these pseudonymization processes with a simple descriptive language, which we have called MAGICPL, plus a relati…
Iconic framework for cooperative coding
2018
The description of an innovative framework built on top of Web-based visual programming environment is the primary aim of this contribution. In the last decade, many frameworks oriented to visual languages have been introduced in literature to improve the skill on programming languages, but at the best of our knowledge, no framework has been specially designed to support collaborative work on heterogeneous distributed environments. Therefore, SIRENE introduces a new framework in which beginners and experts can cooperate to develop algorithms by using a visual and iconic paradigm. Students, in the classroom or connected from everywhere, can be involved into the definition of the algorithm, c…
Panel Discussion: Systems for Data Analysis What they AEE; what they Could be?
1985
CRANE: I’d like to pose a couple of questions: (1) Command Languages — A tool for the astronomer or for the programmer? (2) Portability — Holy Cow or Red Herring? I propose that we start with the first one and see how far we get. If we don’t get past that, fine. If we get on to the question of portability, this is also fine. Let me just open up the discussion by asking Rudi Albrecht to make a comment.
2MOLCAS as a development platform for quantum chemistry software
2004
This work presents the quantum chemistry package MOLCAS, with emphasis on its usefulness as a platform for developing new quantum chemical codes, and the reader is assumed to be familiar with such a process. The development of new codes for quantum chemistry is a time-consuming job that can be dramatically simplified by using libraries for standard problems (such as calculation of integrals), and tools to surmount computer language and operating system limitations. The MOLCAS quantum chemistry software contains modules for a variety of quantum chemical methods, such as Hartree-Fock (HF), density functional theory (DFT), coupled-cluster (CC), and multiconfigurational (MCSCF) approaches, incl…